※ Protein Information
Tag Content
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribonuclease Y
Protein Synonyms/Alias
 RNase Y
Gene Name
 rny
Gene Synonyms/Alias
 CA_C1816
Created Date
 3-June-2014
Organism
 Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
NCBI Taxa ID
 272562
Phosphorylation
Position
Peptide
Code
Type
References
24 IITIVEMYIRRKYAW Y HTP [1]
19 VCLVIIITIVEMYIR T HTP [1]
10 NTNKLIITIVCLVII T HTP [1]
Reference
 [1]Phosphoproteomic investigation of a solvent producing bacterium Clostridium acetobutylicum.
 Bai X,Ji Z
 Appl. Microbiol. Biotechnol. 2012, Jul;95(1):201-11. [PMID:22627760]
Functional Description From UniProt
 FUNCTION: Endoribonuclease that initiates mRNA decay (By similarity)
Sequence Annotation From UniProt
 TRANSMEM 5 25 Helical; (Potential)
Key Word From UniProt
 Cellmembrane; Completeproteome; Endonuclease; Hydrolase; Membrane; Nuclease; Referenceproteome; RNA-binding; Transmembrane; Transmembranehelix
Protein Sequence
 MNNTNKLIIT IVCLVIIITI VEMYIRRKYA WAKISKAEED AKKIKEDAKR EAETLKKEAT 60
 LEAKEEAHRL RSDLDKETRE RRNEIQRLER RNLQREETLD KKNDLLEKRE NGLNERENSI 120
 QERQNTIEQL YKEEREKLEQ LSGLTSEEAK NLLLEEVNRE IKHEKSIMIK EVEQKAKEEA 180
 DKKAREIITY AIQRCAADHV AESTVYVVSL PNDEMKGRII GREGRNIRAI ETLTGVDLII 240
 DDTPEAVILS GFDPVRREVA KVALEKLILD GRIHPARIEE MVEKAKKEVE NNIKEEGEQA 300
 TFETGVHGLH SELTRLLGRL KYRTSYGQNV LKHSIEVSYL AGFMAAELGI DPTFAKRAGL 360
 LHDIGKAVDH EVEGPHALIG AEVSKKYHEL PLIVNAIGAH HGDVEPQSLE AILVQAADAI 420
 SAARPGARRE TLEAYIKRLE KLEEIANSYE GVEKSYAIQA GREIRIMVKP ETVDDAGSIE 480
 MARGIVKKIE EQLEYPGQIK VNVIRETRAV EYAK 514
  GO:0016021   C:integral component of membrane IEA:UniProtKB-KW
  GO:0005886   C:plasma membrane IEA:UniProtKB-SubCell
  GO:0004521   F:endoribonuclease activity IEA:UniProtKB-HAMAP
  GO:0046872   F:metal ion binding IEA:InterPro
  GO:0008081   F:phosphoric diester hydrolase activity IEA:InterPro
  GO:0003723   F:RNA binding IEA:UniProtKB-HAMAP
  GO:0006402   P:mRNA catabolic process IEA:UniProtKB-HAMAP
  IPR022711   Cyclic-nucl_2Pdiesterase_N.
  IPR003607   HD/PDEase_dom.
  IPR006674   HD_domain.
  IPR004087   KH_dom.
  IPR004088   KH_dom_type_1.
  IPR017705   Ribonuclease_Y.
  IPR006675   Uncharacterised_HDIG.
  PF12072   DUF3552.
  PF01966   HD.
  PF00013   KH_1.
  SM00471   HDc.
  SM00322   KH.
  PS50084   KH_TYPE_1.