※ Protein Information
Tag Content
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribonuclease R
Protein Synonyms/Alias
 RNase R
Gene Name
 vacB
Gene Synonyms/Alias
 rnr; OrderedLocusNames=ECs5155, Z5786
Created Date
 3-June-2014
Organism
 Escherichia coli O157:H7
NCBI Taxa ID
 83334
Phosphorylation
Position
Peptide
Code
Type
References
28 QEREAEKYANPIPSR Y HTP [1]
Reference
 [1]The Escherichia coli phosphotyrosine proteome relates to core pathways and virulence.
 Hansen AM,Chaerkady R,Sharma J,Díaz-Mejía JJ,Tyagi N,Renuse S,Jacob HK,Pinto SM,Sahasrabuddhe NA,Kim MS,Delanghe B,Srinivasan N,Emili A,Kaper JB,Pandey A
 PLoS Pathog. 2013;9(6):e1003403. [PMID:23785281]
Functional Description From UniProt
 FUNCTION: 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs (By similarity)
Sequence Annotation From UniProt
 
Key Word From UniProt
 Completeproteome; Cytoplasm; Exonuclease; Hydrolase; Nuclease; RNA-binding
Protein Sequence
 MTKIFIRDDN GGTEMSQDPF QEREAEKYAN PIPSREFILE HLTKREKPAS RDELAVELHI 60
 EGEEQLEGLR RRLRAMERDG QLVFTRRQCY ALPERLDLVK GTVIGHRDGY GFLRVEGRKD 120
 DLYLSSEQMK TCIHGDQVLA QPLGADRKGR REARIVRVLV PKTSQIVGRY FTEAGVGFVV 180
 PDDSRLSFDI LIPPDQIMGA RMGFVVVVEL TQRPTRRTKA VGKIVEVLGD NMGTGMAVDI 240
 ALRTHEIPYI WPQAVEQQVA GLKEEVPEEA KAGRVDLRDL PLVTIDGEDA RDFDDAVYCE 300
 KKRGGGWRLW VAIADVSYYV RPPTPLDREA RNRGTSVYFP SQVIPMLPEV LSNGLCSLNP 360
 QVDRLCMVCE MTVSSKGRLT GYKFYEAVMS SHARLTYTKV WHILQGDQDL REQYAPLVKH 420
 LEELHNLYKV LDKAREERGG ISFESEEAKF IFNAERRIER IEQTQRNDAH KLIEECMILA 480
 NISAARFVEK AKEPALFRIH DKPSTEAITS FRSVLAELGL ELPGGNKPEP RDYAELLESV 540
 ADRPDAEMLQ TMLLRSMKQA IYDPENRGHF GLALQSYAHF TSPIRRYPDL MLHRAIKYLL 600
 AKEQGHQGNT TETGGYHYSM EEMLQLGQHC SMAERRADEA TRDVSDWLKC DFMLDQVGNV 660
 FKGVISSVTG FGFFVRLDDL FIDGLVHVSS LDNDYYRFDQ VGQRLMGESS GQTYRLGDRV 720
 EVRVEAVNMD ERKIDFSLIS SERAPRNVGK TAREKAKKGD AGKKGGKRRQ VGKKVNFEPD 780
 SAFRGEKKTK PKAAKKDARK AKKPSAKTQK IAAATKAKRA AKKKVAE 827
  GO:0005737   C:cytoplasm IEA:UniProtKB-SubCell
  GO:0008859   F:exoribonuclease II activity IEA:UniProtKB-HAMAP
  GO:0003723   F:RNA binding IEA:UniProtKB-HAMAP
  IPR011129   Cold_shock_prot.
  IPR012340   NA-bd_OB-fold.
  IPR003029   Rbsml_prot_S1_RNA-bd_dom.
  IPR022967   RNA-binding_domain_S1.
  IPR013223   RNase_B_OB_dom.
  IPR022966   RNase_II/R_CS.
  IPR004476   RNase_II/RNase_R.
  IPR011805   RNase_R.
  IPR013668   RNase_R_HTH_12.
  PF08461   HTH_12.
  PF08206   OB_RNB.
  PF00575   S1.
  SM00357   CSP.
  SM00316   S1.
  PS01175   RIBONUCLEASE_II.
  PS50126   S1.