※ Protein Information
Tag Content
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Polyribonucleotide nucleotidyltransferase
Protein Synonyms/Alias
 PNPase
Gene Name
 pnp
Gene Synonyms/Alias
 RPA0432
Created Date
 3-June-2014
Organism
 Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
NCBI Taxa ID
 258594
Phosphorylation
Position
Peptide
Code
Type
References
653 KDGLVHISQLAAGRV S HTP [1]
Reference
 [1]Phosphoproteomic analysis of Rhodopseudomonas palustris reveals the role of pyruvate phosphate dikinase phosphorylation in lipid production.
 Hu CW,Lin MH,Huang HC,Ku WC,Yi TH,Tsai CF,Chen YJ,Sugiyama N,Ishihama Y,Juan HF,Wu SH
 J. Proteome Res. 2012, Nov, 2;11(11):5362-75. [PMID:23030682]
Functional Description From UniProt
 FUNCTION: Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction (By similarity)
Sequence Annotation From UniProt
 
Key Word From UniProt
 Completeproteome; Cytoplasm; Magnesium; Metal-binding; Nucleotidyltransferase; RNA-binding; Transferase
Protein Sequence
 MFNIHSVEID WGGRPLKLET GKVARQADGA VVATYGETVV LATVVAAKAP REGVDFLPLT 60
 VDYQEKAYAA GRIPGGYFKR EGRPTEKETL VSRLIDRPIR PLFADGWRNE TQVIVTVLSH 120
 DMENDPDVLA MVAASAALTL SGVPFKGPIG AARVGFINDE YVLNPVLDEM AETQLELVVA 180
 GTADAVLMVE SEAKELSEEI MLGAVMFGHR HFQPVIDAII DLAEKAAKEP RELTVVDDSE 240
 IEKEMLGLVE QELRAAYAIP VKQDRYAAVG KVKEKAIAHF FPEGQEPKYD KLRIAGVFKE 300
 LEAKIVRWNI LDTGKRIDGR DSKTVRNILA QVGVLPRTHG SALFTRGETQ AMVVTTLGTG 360
 EDEQYVDSLS GTYKETFLLH YNFPPYSVGE TGRLGGTKRR EIGHGKLAWR AIHPVLPPHH 420
 EFPYTIRVVS EITESNGSSS MASVCGASLA LMDAGVPLKR PTAGIAMGLI LEGERFAVLS 480
 DILGDEDHLG DMDFKVAGTE AGITSLQMDI KIAGITEEIM KVALGQAKDG RIHILGEMSK 540
 ALDRARAELG EHAPRIETFK IPTDKIREVI GTGGKVIREI VEKTGAKVNI EDDGTVKVAS 600
 SDGESIKAAI KWIKSIASDP EVGEIYEGTV VKVMEFGAFV NFFGAKDGLV HISQLAAGRV 660
 QKTSDVVKEG DKVKVKLLGF DDRGKTRLSM KVVDQTTGED LEAKQKAEAK AEGEAPAQAA 720
 GE 722
  GO:0005737   C:cytoplasm IEA:UniProtKB-SubCell
  GO:0000175   F:3'-5'-exoribonuclease activity IEA:InterPro
  GO:0000287   F:magnesium ion binding IEA:UniProtKB-HAMAP
  GO:0004654   F:polyribonucleotide nucleotidyltransferase activity IEA:UniProtKB-HAMAP
  GO:0003723   F:RNA binding IEA:UniProtKB-HAMAP
  GO:0006402   P:mRNA catabolic process IEA:UniProtKB-HAMAP
  GO:0006396   P:RNA processing IEA:InterPro
  IPR001247   ExoRNase_PH_dom1.
  IPR015847   ExoRNase_PH_dom2.
  IPR004087   KH_dom.
  IPR004088   KH_dom_type_1.
  IPR012340   NA-bd_OB-fold.
  IPR012162   PNPase.
  IPR027408   PNPase/RNase_PH_dom.
  IPR015848   PNPase_PH_RNA-bd_bac/org-type.
  IPR003029   Rbsml_prot_S1_RNA-bd_dom.
  IPR020568   Ribosomal_S5_D2-typ_fold.
  IPR022967   RNA-binding_domain_S1.
  PF00013   KH_1.
  PF03726   PNPase.
  PF01138   RNase_PH.
  PF03725   RNase_PH_C.
  PF00575   S1.
  SM00322   KH.
  SM00316   S1.
  PS50084   KH_TYPE_1.
  PS50126   S1.