※ Protein Information
Tag Content
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 ATP-dependent RNA helicase DeaD
Protein Synonyms/Alias
 
Gene Name
 deaD
Gene Synonyms/Alias
 Pfl01_3987
Created Date
 3-June-2014
Organism
 Pseudomonas fluorescens (strain Pf0-1)
NCBI Taxa ID
 205922
Phosphorylation
Position
Peptide
Code
Type
References
212 PKHVKIQSKTQTVTA S HTP [1]
Reference
 [1]Ser/Thr/Tyr phosphoproteome analysis of pathogenic and non-pathogenic Pseudomonas species.
 Ravichandran A,Sugiyama N,Tomita M,Swarup S,Ishihama Y
 Proteomics 2009, May;9(10):2764-75. [PMID:19405024]
Functional Description From UniProt
 FUNCTION: DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation (By similarity)
Sequence Annotation From UniProt
 
Key Word From UniProt
 ATP-binding; Completeproteome; Cytoplasm; Helicase; Hydrolase; Nucleotide-binding; RNA-binding; Stressresponse
Protein Sequence
 MTQEIGGFAA LELHPNIVAA VVATGYEEPS AIQQQSIPII LAGHDMIGQA QTGTGKTAAF 60
 ALPILHRIDP SKREPQALIL APTRELALQV ATAFETYAKQ MPGVTVVAVY GGAPMGPQLK 120
 AIRNGAQIVV ATPGRLCDHL RRDEKVLQTV NHLVLDEADE MLKLGFMDDL EVIFKAMPET 180
 RQTVLFSATL PQSIRAIAER HLRDPKHVKI QSKTQTVTAI EQAHLLVHAD QKTSAVLSLL 240
 EVEDFDALIM FVRTKQATLD LASALDAKGY KAAALNGDIA QNQRERVIDS LKDGRLDIVV 300
 ATDVAARGLD VPRITHVFNV DMPYDPESYV HRIGRTGRAG REGRALLLVT PRERRMLQVI 360
 ERVTGQKVAE VRLPDAQAVL DARIKKLTNS LSPLVADAES THGDLLDRLT ADIGCTPRAL 420
 AAALLRKATN GQALNLAAIE KERPLVPNSA PRGDRPERSG DRPDRGDRER RAPMPLGEGR 480
 ARCRTALGAR DGIAAKNLLG AILNEGGLAR EAIGRIQVRD SFSLVELPED GLDKLLTKLK 540
 DTRVAGKQLK LRRYRED 557
  GO:0005737   C:cytoplasm IEA:UniProtKB-SubCell
  GO:0005524   F:ATP binding IEA:UniProtKB-HAMAP
  GO:0004004   F:ATP-dependent RNA helicase activity IEA:UniProtKB-HAMAP
  GO:0003723   F:RNA binding IEA:UniProtKB-HAMAP
  GO:0070417   P:cellular response to cold IEA:InterPro
  GO:0000027   P:ribosomal large subunit assembly IEA:UniProtKB-HAMAP
  GO:0006401   P:RNA catabolic process IEA:UniProtKB-HAMAP
  IPR005580   DbpA_RNA-bd.
  IPR028618   DEAD_helicase_DeaD.
  IPR011545   DNA/RNA_helicase_DEAD/DEAH_N.
  IPR014001   Helicase_ATP-bd.
  IPR001650   Helicase_C.
  IPR027417   P-loop_NTPase.
  IPR000629   RNA-helicase_DEAD-box_CS.
  IPR014014   RNA_helicase_DEAD_Q_motif.
  PF03880   DbpA.
  PF00270   DEAD.
  PF00271   Helicase_C.
  SM00487   DEXDc.
  SM00490   HELICc.
  PS00039   DEAD_ATP_HELICASE.
  PS51192   HELICASE_ATP_BIND_1.
  PS51194   HELICASE_CTER.
  PS51195   Q_MOTIF.